Diagnosing Southern blight and White mold in tomato and pepper

There have been a few reports of Southern blight (Sclerotinia rolfsii) and White mold (Sclerotinia sclerotiorum) on tomato and pepper in New Jersey. Southern blight is much more common in vegetable areas south of the state where summer temperatures remain hotter (above 90°F) for longer periods of time. Like white mold, it can survive in the soil for many years. Symptoms of Southern blight include infection at the base of the stem at the soil line. The resulting infection will girdle the plant causing wilt and death. The fungus will produce white, cottony mycelium and very small, spherical sclerotia which are often have a tannish, brown color.

White mold is more common than Southern blight in New Jersey, and like Southern blight, once introduced into a field or high tunnel it can very difficult to control. The pathogen produces large black sclerotia on the surface and inside infected stems. If sclerotia of either pathogen make their way back into the soil, both can survive for years causing significant problems.

All infected plants need to be removed immediately and disposed of properly to help reduce the chances of sclerotia returning to the soil.

For more information on chemical control please see the 2022/2023 mid-Atlantic Commercial Vegetable Production Recommendations Guide.

Infected root

Symptoms of Southern blight on infected pepper plant. Note the numerous, small white to tan colored sclerotia on the stem.

Infected stem

White mold of tomato. Note the large black sclerotia developing inside the brittle stems.

Diagnosing Collar Rot and Alternaria Stem Rot of Tomato

Collar rot (Alternaria linariae) or Alternaria stem rot (Alternaria alternata f. sp. lycopersici) of tomato are common in young tomato plants. Either can be particularly troublesome in seedlings that have been held in transplant flats for an extended period of time before transplanting in hot, humid greenhouses. Collar rot infections often start where a leaflet branch has been broken or pruned which allows a point of infection. Symptoms of Alternaria stem rot include brown circular to irregular lesions on stems with definitive concentric black rings (very similar to Early blight on infected leaves). Symptoms of Collar rot are similar and may or may not produce concentric black rings. Infections that start in the greenhouse may lead to losses in the field as stems become girdled causing the plant or branches to wilt and die. Most commercial tomato varieties have resistance to Alternaria stem rot. While resistance is lacking to Collar rot, growers should chose varieties with Early blight resistance. Fungicides used to control Early blight are also effective against Collar rot.

Symptoms of Collar rot in young tomatoRotten stem

 

 

Diagnosing pith necrosis in tomato

Symptoms usually begin to appear on random plants throughout the field as green fruit begins to mature. The bacterium (Pseudomonas corrugata) is ubiquitous to soils and develops when weather conditions (cooler nights/very hot, humid days) and cultural practices (i.e., excess heavy N use) lead to favorable conditions for disease development. Symptoms include the development of irregular greasy (at first), brown lesions on main stems and branches. Late pruning (i.e., suckering) can provide entry points for the bacterial disease. Internally, stems will become chocolate brown and mushy. High humidity is necessary for disease development. High nitrogen and lower night temperatures are associated with Pith Necrosis development, where it has been reported around the state this past week. Control begins with cultural practices such as avoiding working in fields with wet foliage, avoiding late pruning, tying when plants are wet, and watching the amount of N applied to plantings. Infected plants can be rouged from field and most often it does not spread to nearby uninfected plants.

Identifying and controlling Botrytis in high tunnel and greenhouse tomato production

Botrytis, or gray mold, caused by the fungus, Botrytis cinerea, can cause significant losses in high tunnel and greenhouse tomato production if not controlled properly. The pathogen can rapidly spread during periods when structures are closed and when relative humidity remains high for long periods of time. This often occurs when outside weather remains cool and damp while heating is needed. Gray mold is favored by temperatures from 64° to 75°F and requires only high humidity (not leaf wetness) to become established. The pathogen has a large host range and once established in an enclosed structure it can be very difficult to control (UMASS). The fungus can survive/overwinter as mycelia or sclerotia in plant debris and in organic soil matter (NCSU).

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Identifying and controlling leaf mold in high tunnel & greenhouse tomato production

Leaf mold occasionally appears in high tunnel or greenhouse tomato production in New Jersey. However, under ideal conditions the disease will develop in field-grown crops. The fungus will cause infection under prolonged periods leaf wetness and when relative humidity remains above 85%. If relative humidity is below 85% the disease will not occur. Therefore, the proper venting of high tunnels and greenhouses on a regular basis is important. The pathogen can survive (overwinter) as a saprophyte on crop debris or as sclerotia in the soil. Conidia (spores) of the fungus can also survive up to one year in the soil.

Symptoms of leaf mold on infected tomato plant. Note the bright yellow leaves and the olive-green spores developing on the undersides of leaves.

Symptoms of leaf mold on infected tomato plant. Note bright yellow leaves and olive-green spores developing on undersides of leaves.

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Magnesium Deficiency in Tomato and the Relationship with other Important Nutrients

How can growers prevent nutrient deficiencies in crops? Soil testing and tissue testing for fertility management of vegetable crops is key to having the correct levels of nutrients to have a high yielding, high quality crop to harvest and market. Soil testing is best done in fall so that pH levels can be adjusted with soil amendments like lime that correct pH levels for maximum return on fertilizer uptake. Why adjust pH to proper levels? Plant nutrients are hindered in availability when soil pH is too high or too low. Besides pH, fertility levels are important to monitor and adjust pre-plant for the best start to new seedlings and transplants.

With tomato production it is widely known that calcium (Ca) levels in soil are important for prevention of blossom end rot. Therefore, tomato growers have focused on application of adequate and even high levels of calcium to prevent this fruit disorder. Another primary nutrient, potassium (K) is also important for plant and fruit quality for regulating water movement/water loss in the plant and other functions. In addition, it is important to also pay attention to magnesium (Mg) levels. Ca, K, and Mg are all important in successful tomato production. It is important to know these nutrients compete with each other for plant uptake and their proper levels based on soil and tissue testing.

Even though blossom end rot resulting from Ca deficiency can cause tomato fruit to be unmarketable, Mg deficiency can reduce overall plant health and ultimately quality and yield. Low K in the plant can make the plant less tolerant of heat and drought stress. Magnesium in tomato plants plays an essential role in photosynthesis (the process of the plant to make energy to fuel growth), protein synthesis (necessary in cell formation), activation of plant enzymes (necessary for many cellular and growth functions), and chlorophyll synthesis (the green pigment in plants that is essential for optimum plant growth).

Magnesium deficiency can occur, especially in sandy soils, when soil is overwatered or after heavy rainfall events. However, when Ca and Mg levels are out of balance, deficiencies can still occur even when both are showing adequate levels in the soil. It is more important to look at the actual levels. If one is significantly higher than the other deficiency symptoms may occur. Since both Ca and Mg are +2 ions in soil when taken up by plant roots, the plant indiscriminately takes up these two nutrients. Therefore, if there is abundant Ca and lower Mg, Mg deficiencies may be seen. Conversely, when Mg levels are higher than Ca levels blossom end rot may be seen. It is best to have these two nutrients in soil at the same levels to keep a balance in uptake and ultimately promote both healthy fruit formation and foliage growth. Allowing Mg levels to remain deficient in the plant will result in lower yields and less energy for fruit production later in the plants lifecycle.

Magnesium deficiency is first seen on tomato plants as interveinal chlorosis – yellowing of leaf tissue between the veins of older leaves. Eventually the leaves become mostly yellow and purplish-red spots that become necrotic on the interveinal tissue may occur. See photos taken in the field on June 7, 2023.

Deficiency symptoms can be seen at any stage of growth, but are generally first seen when plants begin to flower, start fruit set, and fruit enlargement. When plants change from vegetative growth (production of leaves and stems) to reproductive growth (flowering and fruiting) leaves are stressed and energy and resources are reallocated into growth and development of new progeny (seed and fruit).

Fortunately, Mg deficiency is easily corrected when caught early in the tomato plant’s growth by the application of Epsom salts. Rates differ depending on soil type, soil levels, and plant tissue levels. Mg rates can vary from 5-25 pounds per acre. Application can be done through drip irrigation systems or applied on the soil surface by spraying near the rootzone. When applying through the drip tape, be sure to run the lines with clean water for at least 20 minutes after the salts have gone thorough to prevent salt build up in the emitters. Foliar applications of Mg can be sprayed on plants, but are not as efficient as soil application and root absorption. There are other products available to correct low levels of Mg, but most data available for the use of Epsom salts to raise Mg levels. Pre-plant, the use of high Mg liming products can balance Ca and Mg levels in soil if Mg levels are lower than Ca levels. Therefore, when lime is needed to raise pH it is very important to look at Ca and Mg levels on the soil test results before selecting which type of lime will work best for adjusting the levels of these two very important plant nutrients.

When managing fertility levels for successful crop production, it is important to know the levels of plant nutrients in soil and tissue tests. It is as important to understand the interactions between plant nutrients and how they affect plant growth. Seeing an “optimum” or “sufficient” level on a soil or tissue test report is not enough to fully determine what is needed for high yielding, high quality crops.