Andy Wyenandt

This is an archive of Dr. Wyenandt's posts on the Plant and Pest Advisory.

Controlling Cercospora leaf spot in beet

Cercospora leaf spot (CLS), caused by Cercospora beticola, is an important and emerging disease in beet and swiss chard production in New Jersey. Efforts to control this disease has become more difficult in the past few years in some areas of southern New Jersey. The soil-borne fungal pathogen, once established in fields, can survive in the soil for up to 2 years on infected debris and on weed hosts such as Chenopodium, goosefoot, and pigweed. The pathogen may also be seed-borne. Symptoms of infection include numerous, small tan leaf spots with distinct dark purple margins that are easily diagnosed (Fig. 1). Overhead irrigation and rainfall help spread the pathogen throughout the field.  Cercospora beticola is most damaging in warm weather (day temperature of 77 to 90° F and night temperature above 60° F).

Controlling Cercospora leaf spot with preventative fungicide applications has become challenging for some growers in New Jersey. The pathogen is known to have developed resistance to important fungicide classes in recent years, such as the QoIs (FRAC code 11) and the DMIs (FRAC code 3) in different regions of the country, based on fungicide use. This is not surprising since resistance development can occur when fungicides in these groups are used extensively over many years. In New Jersey, azoxystrobin has been used extensively for years to manage this disease.

Cultural practices to help mitigate losses to Cercospora leaf spot

There are a number of cultural practices growers can do to help reduce losses to CLS.

  • Start with certified, disease-free seed, or treat seed using hot water seed treatment method.
  • Avoid fields with a known history of CLS.
  • Rotate to non-host crops (outside of the Chenopodium family) for 2-3 years.
  • Bury infected crop residues and destroy volunteer plants and weed hosts.
  • Burn down fields after harvesting.
  • Avoid planting succession crops close together (at least 100 meters apart).
  • Avoid overhead irrigation if it will result in prolonged leaf wetness periods (e.g., late evening or at night); irrigate early to mid-day when leaves will dry fully or use drip irrigation for small plantings.
  • Using the proper fungicides, rates, and fungicide rotations.

Fungicides for controlling Cercospora leaf spot

In recent years a number of new fungicides have been labeled for CLS control. Many of these fungicides contain two different active ingredients with more than one mode of action. Growers who have relied on managing CLS with azoxystrobin (FRAC code 11) for years and suspect a loss in efficacy should consider removing it from their fungicide program. There is a good chance fungicide resistance has developed. In 2019, a field study was done at RAREC to examine the efficacy of different fungicides for CLS control (Table 1). The fungicide efficacy trial was established in field with a  history of CLS; where the field was inoculated with infected debris collected from a farm in southern New Jersey. Fungicides were applied weekly for 5 weeks with overhead irrigation to help promote disease development.

Fungicide program (application timing) FRAC code active ingredient(s) Rate per acre Labeled for beet AUDPC value
Untreated control n/a n/a n/a n/a 617 a
Kocide 3000 (1-5) M01 copper hydroxide 1.0 lb Yes 564 ab
Quadris 2.08F (1-5) 11 azoxystrobin 15.5 fl oz Yes 538 bc
Fontelis 1.67SC (1-5) 7 penthiopyrad 30.0 fl oz Yes 510 bcd
Miravis Prime 3.34SC (1-5) 7 + 12 pydiflumetofen + fludioxonil 13.4 fl oz Yes 497 bcd
Merivon 2.09SC (1-5) 7 + 11 fluxapyroxad + pyraclostrobin 5.5 fl oz Yes 471 cd
Tilt 3.6EC (1-5) 3 propiconazole 4.0 fl oz Yes 445 d

 

Cercospora leaf spot development was extremely high during the course of the study. Area Under Disease Progress Curves (AUDPC) were calculated to determine the amount of disease development under each fungicide program (Table 1). CLS development was highest in the untreated control (UTC), with no significant differences between the UTC and weekly copper applications suggesting that weekly copper applications did not help reduce CLS in this study (Table 1). Weekly applications of Quadris, Fontelis, Miravis Prime were not significantly different, but significantly lower than the UTC (Table 1). Control of CLS was best with weekly applications of Tilt and Merivon, but these were not significantly different from weekly applications of Miravis Prime or Fontelis (Table 1). Results of this study suggest that growers with resistance concerns who have relied heavily on copper and azoxystrobin for CLS control should consider using other fungicides in their weekly preventative fungicide programs. Control programs should focus on applying fungicides with more than one mode of action and focus on rotating fungicides with different modes of action. For example: (please see 2020/2021 Commercial Vegetable Production Guide), Apply Tilt (FRAC code 3) followed by Miravis Prime (7 + 12), then tebuconazole (3), then Merivon (7+ 11), then Tilt (FRAC code 3), then Luna Tranquilty (7 + 9). Remember, resistance development to FRAC code 11 fungicides (QoIs) is qualitative and controlled by single point mutations, once resistance develops the fungus is completely resistance (to all fungicides in the group). Resistance development in FRAC code 3 fungicides (DMIs) is quantitative which often characterized as a gradual loss of resistance over time. As a note, FRAC code 3 fungicides should always be applied at the highest rate, using lower rates may increase selection pressure.

Organic Control Options

Controlling CLS in organic production systems starts by following and executing good cultural practices listed above. Always purchase certified seed. Use the hot water seed treatment method to help disinfested seed. Avoiding fields with a history of the disease. Producing beet on mulch and drip irrigation in small operations should be considered. This will help reduce weed pressure (as well as potential hosts) and reduce the need for overhead irrigation. Organic copper applications may not be effective in some operations where disease pressure is extremely high. Unfortunately, control of CLS with organic and biopesticides has been difficult, therefore good cultural practices must be followed accordingly.

 

Copper resistance in bacterial leaf spot found in New Jersey during 2020 growing season

Copper resistance has been detected in bacterial leaf spot of tomato and pepper and in Pseudomonas chicorii, the causal agent of bacterial leaf spot in basil, in New Jersey. While not surprising, copper resistance has been known to develop for decades now; however, this is the first time it has been confirmed in vegetable crops in New Jersey. Copper applications for the control of bacterial diseases in many crops has been a mainstay for decades now and is often applied in weekly protectant fungicide programs. In 2019 and 2020, with help from Dr. Nrupali Patel and Dr. Don Kobayashi, bacteriologists in the Department of Plant Biology located on the New Brunswick campus, a survey was begun to determine which species of bacterial leaf spot are most prevalent in New Jersey vegetable crops. Bacterial leaf spot can be caused by four species of Xanthomonas: X. euvesicatoria, X. vesicatoria, X. perforans, and X. gardneri. Currently, there are four races of BLS found in tomato (T1-T4; one for each of the 4 species stated above) and eleven races found in pepper (0-10). Differential tests in southern New Jersey using various bell pepper lines over the past 15 years has suggested that the number of races of BLS in pepper has increased over time; with all races present in the State to date. Lab testing results from samples collected from the small number of NJ vegetable farms the last two summers has shown the presence of X. euvesicatoria in pepper, as well as X. euvesicatoria and X. perforans in both tomato and pepper in the state, with ~50% of all samples testing positive for copper resistance.

How do you know what species of bacteria are present on your farm?

The only way to determine which species of bacteria are present in tomato or pepper crops on your farm are to have them identified through laboratory methods.

How do you know what races of the pathogen are present on your farm?

That’s a difficult question to answer. Up to now, the only way to know is through differential testing. That means planting a number of different bell peppers with varying BLS resistance packages and monitoring which cultivars develop symptoms. For example, if you detect BLS development in Aristotle X3R (which has resistance to races 1,2, & 3); then you possible have races 4-10 present on your farm. If you were to plant Turnpike in that same field and you have BLS development in it, then you possibly have race 6 or 10 present, because Turnpike has resistance to BLS races 0-5 and 7,8,9. It’s extremely important to know what races of BLS are present so you can chose the proper cultivars to grow. Choosing the proper cultivar will do two things: significantly reduce the chances of BLS development and significantly reduce the number of copper applications on your bell pepper crop. As a note, there are a few non-bell peppers available with BLS resistance packages (see 2020/2021 Commercial Vegetable Production Recommendations Guide).

How do you know if copper resistance is present on your farm? 

Growers who have used copper applications for controlling bacterial leaf spot in crops such tomato or pepper for many years should always monitor for efficacy. If you notice or have noticed a loss in copper efficacy over time, then there is a good chance copper resistance is present. Once copper resistance is detected, further applications will be unwarranted and ineffective. The only method to truly determine if copper resistance is present is through laboratory testing, however growers who pay close attention to efficacy should have a good idea if copper is still effective.

What can you do to mitigate bacterial leaf spot development on your farm?

In crops such as bell pepper, it comes down to growing cultivars with resistance to BLS and knowing what races are present on your farm. Many of the recommend commercial cultivars have varying resistance packages to the different races of the pathogen. Some cultivars, such as Paladin which has Phytophthora resistance has no resistance to BLS. Other “older” cultivars such as Aristotle X3R has resistance to races 1-3; newer cultivars such as Turnpike has resistance to races 0-5,7-9; while cultivars such as Playmaker and 9325 have resistance to 0-10 (also known as X10R cultivars). Unfortunately, BLS resistance in commercial tomato varieties are lacking, but efforts from around the world are making progress.

Moving forward in 2021.

More sampling and surveying are planned for the 2021 production season in New Jersey. Growers who are interested having tomato or pepper samples collected from their farm for species determination and copper resistance testing are encouraged to contact their county agent so arrangements can be made.

 

 

 

Understanding and Controlling Tomato Brown Rugose Fruit Virus

Tomato Brown Rugose Fruit Virus (ToBRFV) is an emerging virus in greenhouse tomato production worldwide. The virus was first identified in Israel a few years ago and has since been found in Europe, Asia, Mexico, and the US.  The pathogen is known to be present in greenhouse tomatoes in Mexico, and has occasionally been found in field tomatoes grown there (UMASS); it has also been found on imported fruit in FL (Also see VGN story below). An outbreak was reported (and contained) in CA in early 2019 but, unfortunately, the virus was found in greenhouse tomato production in New Jersey this past fall.

ToBRFV is more severe on young tomato plants and can result in 30-70% yield loss (UFL). Foliar symptoms of ToBRFV on tomato and pepper include deformed, crinkled leaves, mosaic, mottling, flecking, chlorosis, and/or necrosis (see images). Fruit symptoms include discoloration and rough brown patches or ringspots. Irregular fruit shape and maturation patterns may also occur. Browning of the veins in the fruit calyx in the early stages of fruit ripening may also be observed. Symptom expression can vary widely among tomato cultivars (UMASS); while some green fruit may be infected but remain asymptomatic until the fruit starts to ripen.

ToBRFV is a member of the tobamovirus family along with tobacco mosaic (TMV), tomato mosaic (ToMV), and tomato mottle mosaic (ToMMV). ToBRFV is especially worrisome for tomato growers because it has overcome the Tm-22 gene that confers resistance to tobamoviruses in many tomato cultivars. Like TMV, ToBRFV is very stable and easily transmitted by mechanical means; in a highly managed crop such as greenhouse tomatoes, this means that human activity is the primary vector. The virus may also be transmitted mechanically by bumble bees employed to pollinate greenhouse crops. The virus can be seedborne and research indicates that it is associated with the seed coat, not the embryo. This means that treatments such as hot water or steam should be effective in removing the virus from seed (UMASS).

Management practices for ToBRFV include planting of disease free seed and seedlings, scouting plants regularly for symptoms, and isolating symptomatic plants. Disinfect tools and workers’ hands frequently. Recent research has demonstrated that the most effective disinfectants include 10% bleach, 50% Lysol, and 20% nonfat dry milk (UMASS). Currently, no commercial tomato varieties are tolerant to ToBRFV. Peppers with tolerance to TMV and pepper mild mottle virus (PMMoV) have shown some tolerance (MSU). ToBRFV’s high stability allows it to stay infectious in the soil, in plant debris and on stakes for long periods—up to 20 years. There are reports of spread by bumble bee pollinators in greenhouse situations. However, there are no reports of plant-to-plant transmission by aphids, leafhoppers or white flies (MSU).

There are no sprays that can be applied that are effective in helping to reduce the virus’s spread. Seed and transplant production are the most critical steps since contamination at these steps may create a risk of further contamination (MSU). A number of County Offices have the equipment for doing the hot water seed treatment method. Please contact your county agent for more information. Importantly, as a note, there is very limited to no information on infested seed sources, with only a few greenhouse tomato cultivars with known problems.

Recommended actions include (from MSU):

  • Start with certified clean or treated seed from a reputable dealer. Do not purchase seed from unverified sources, especially if they come from known restricted areas.
  • Have greenhouse workers wash and sterilize hands and tools often.
  • Supply single-use gloves that are discarded between greenhouse ranges.
  • Provide protective clothing that stays in that greenhouse range or that is well washed before going to another range.
  • Dispose of symptomatic plants and plants within 5 feet of infected plants. Also, dispose of plants, strings, trays and media through incineration—DO NOT spread it out on your fields (or reuse it for other crops in the greenhouse)!
  • Monitor movement of equipment and workers between fields. Thoroughly wash equipment and possibly have workers bring a change of clothes.
  • Rogue and incinerate symptomatic plants and conduct any daily activity last in that greenhouse followed by good sanitation.

On November 15, 2019, USDA/APHIS issued an emergency federal order that calls for pre-export testing of tomato and pepper propagative material (plants, seeds, grafts, and cuttings) and fruit produced in any country where ToBRFV has been detected; to date, this list includes Israel, Jordan, Turkey, Greece, Italy, the United Kingdom, the Netherlands, China, and Mexico. Countries where ToBRFV has not been reported may state this fact by providing a letter from the nation’s plant protection organization: propagative material and fruit exported to the USA will then be exempt from the testing requirement. Tomato and pepper fruit from Canada will also be subject to inspection prior to export, because Canada imports these crops from Mexico and re-exports them to the US. US Customs and Border Protection will also increase inspections at U.S. ports of entry to ensure imported tomato and pepper fruit from Mexico, Israel, the Netherlands, and Canada are free from symptoms of ToBRFV. (UMASS, USDA)

The NJDA, in cooperation with USDA APHIS PPQ, has been assisting affected NJ tomato producers in identifying critical control points and implementing the best management practices necessary to reduce the threat of introducing Tomato Brown Rugose Fruit Virus (ToBRFV) into future production. Tomato growers in New Jersey who suspect ToBRFV are encouraged to contact their county agent and the NJDA Division of Plant Industry. The NJDA is working with USDA APHIS PPQ to establishing testing protocols and will facilitate the screening of suspect plants.

References:

Dr. Anglela Madeiras (UMass)

http://ag.umass.edu/greenhouse-floriculture/fact-sheets/tomato-brown-rugose-fruit-virus-tobrfv

Dr. Ron Goldy (Michigan State University)

https://www.canr.msu.edu/news/tobrfv-a-new-concern-for-tomato-and-pepper-producers

Kendall Stacy (University of Florida)

http://blogs.ifas.ufl.edu/pestalert/2019/07/23/tomato-brown-rugose-fruit-virus/

American Seed Trade Association

https://www.betterseed.org/wp-content/uploads/ToBRFV-QA.pdf

USDA/APHIS

https://www.aphis.usda.gov/aphis/newsroom/stakeholder-info/sa_by_date/2019/sa-11/tomato-brown-rugose-fruit-virus

Vegetable Grower News – Tomato Brown Rugose Virus Concerns Growers

Vegetable Disease Update – 9/17/19

  • All cucurbit growers are encouraged to scout their fields on a regular basis and continue to use a downy mildew specific fungicide program. Fungicides that are specific to CDM should be included in weekly fungicide maintenance programs for cucurbit powdery mildew control. To track the progress of CDM in the US please visit the CDMpipe forecasting website here.
  • Basil downy mildew has been reported in New Jersey on BDM susceptible and resistant sweet basil lines. All basil growers should continue to scout and follow a BDM specific fungicide program even when using DMR varieties. To track the progress of BDM in the US please visit here.
  • Downy mildew has been reported in turnip greens. Growers who have fall leafy greens and cole crops should scout daily and be proactive and initiate a regular downy mildew specific fungicide program. Although its been relatively dry, spotty showers, cooler nights, and longer periods of dew (leaf wetness) have made conditions ideal for downy mildew development across a number of susceptible crops.
  • Pepper anthracnose continues to be reported.
  • The 2019 Fungicide Resistance Management Guide for Vegetable Crops in the mid-Atlantic Region is now available for FREE online.
  • For more information on controlling these and other important diseases please see the 2019 Mid-Atlantic Commercial Vegetable Production Guide. The guide is available for FREE online by following the links on the Plant and Pest Advisory website. Hardcopies of the 2019 guide can be purchased through your local county Extension office.

Vegetable Disease Update – 8/2/19

  • Cucurbit downy mildew was been reported on pumpkin in Warren County this week. All cucurbit growers are encouraged to scout their fields on a regular basis and to initiate a downy mildew specific fungicide program. This is the first report of CDM on pumpkin in New Jersey this growing season. Fungicides that are specific to CDM should be included in weekly fungicide maintenance programs for cucurbit powdery mildew control. To track the progress of CDM in the US please visit the CDMpipe forecasting website here.
  • There have been a few reports of Southern blight (Sclerotinia rolfsii) on tomato and pepper. Southern blight is much more common in vegetable areas south of the state where summer temperatures remain hotter (above 90°F) for longer periods of time. Like white mold, caused by Sclerotinia sclerotiorum, it can survive in the soil for many years. Symptoms of Southern blight include infection at the base of the stem at the soil-line. The resulting infection will girdle the plant causing wilt and death. The fungus will produce white, cottony mycelium and very small, spherical sclerotia which are often have a tannish, brown color.
  • Cercospora leaf blight has been reported in a newly planted asparagus field.
  • Corn leaf rust has been reported in northern New Jersey.
  • Basil downy mildew has been reported in New Jersey on BDM susceptible sweet basil lines. All basil growers are encouraged to initiate a BDM specific fungicide program even when using DMR varieties. To track the progress of BDM in the US please visit here.
  • Phytophthora blight has been reported in pepper and other crops.
  • Bacterial leaf spot has been widely reported in pepper plantings.
  • The 2019 Fungicide Resistance Management Guide for Vegetable Crops in the mid-Atlantic Region is now available for FREE online.
  • For more information on controlling these and other important diseases please see the 2019 Mid-Atlantic Commercial Vegetable Production Guide. The guide is available for FREE online by following the links on the Plant and Pest Advisory website. Hardcopies of the 2019 guide can be purchased through your local county Extension office.

Controlling important fungal diseases in Asparagus during the summer.

Asparagus growers should consider scouting their fields during the summer months for  foliar disease development. Important pathogens that growers need to scout for on a regular basis include Purple spot, Cercospora, and Rust. [Read more…]